PROJECT DESCRIPTION

PROJECT NUMBER: CR-94-327                                             PROJECT CHIEF: Ron Harvey

SHORT TITLE: Bacteria-Contaminant Interactions

PROJECT TITLE: Interaction of Bacteria with Environmental Contaminants and Solid Surfaces in the Aquatic Environment

PROBLEM:

Although efforts have been made to explain the behavior of heavy metals and refractory organic contaminants in aquatic habitats in the framework of known geophysical and geochemical processes, much remains to be learned about the role of bacteria in such behavior. Of particular interest are bacteria-contaminant interactions in ground water. Due to the persistence of some contaminants in the subsurface environment and to increasing demand for both high quality ground-water and on-land disposal of toxic chemicals and radioisotopes, these interactions should remain important environmental problems for the next few decades. Since significant biotransformation/biodegradation of many environmental contaminants in aquifers and particle-laden surface waters can occur at particle surfaces, explanations for bacteria-contaminant interactions in such environments should take the presence of particles into account.

OBJECTIVES:

Provide some of the microbiological information necessary for more realistic predictions of contaminant behavior in aquatic environments. Obtain information on specific mechanisms of interactions between environmental contaminants and aquatic bacteria, taking into account adsorption, active uptake competition, biotransformation reactions, interactions with extracellular polymers, effects of nutrient and physicochemical gradients, and effects of particle surfaces. Investigate the effect of nutrient and physicochemical conditions upon subsurface transport of bacteria since the role of bacterial transport upon the fate of environmental contaminants in ground water is unknown.

APPROACH:

The complex nature of interactions between bacteria and organic and inorganic contaminants in particle-laden aquatic habitats necessitates an approach involving both field and laboratory studies: (1) Study of the influence of surfaces and interfaces upon microbial heterotrophic activity in particle-laden aquatic environments, including fresh-water aquifers. (2) Study of the effect of organic contaminants upon the distribution, transport, and activity of the bacterial population in ground-water habitats. These studies will be performed with Richard Smith, Water Resources Division (WRD), Boulder. (3) Flow-through column experiments to assess the role of adherent bacteria upon the mobility of selected heavy metals and toxic organic compounds in simulated aquifer environments. Columns will be used to investigate factors affecting the movement of bacteria through porous media. (4) Microcosm studies of bacteria-contaminant interactions.
 
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Ronald Harvey 
Dave Metge
 

                                                                                                                         


Contact Information

Ronald W. Harvey
USGS, WRD
3215 Marine Street
Boulder, CO 80303
Phone: 303-541-3034
Fax: 303-447-2505
email: rwharvey@usgs.gov

 
David W. Metge
USGS, WRD
3215 Marine Street
Boulder, CO 80303
Phone: 303-541-3033
Fax: 303-447-2505
email: dwmetge@usgs.gov
alt. email: bikedog@usa.net

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Project Bibliography 

   GROUNDWATER MICROBIOLOGY & SUBSURFACE MICROBIAL TRANSPORT:

  1. Harvey, R.W., Smith, R.L., and George, L., 1984, Effect of organic contamination upon microbial distributions and heterotrophic uptake in a Cape Cod, Mass. aquifer. Appl. Environ. Microbiol., Vol. 48, p. 1197-1202.
  2. Harvey, R.W., and George, L.H., 1987, Growth determinations for unattached bacteria in a contaminated aquifer. Appl. Environ. Microbiol., Vol. 53, p. 2992-2996.
  3. Harvey, R.W., 1989, Considerations for modeling transport of bacteria in contaminated aquifers. In Abriola, L., ed., Groundwater Contamination: Oxfordshire, UK, IAHS Press, No. 185, p. 75-82.
  4. Harvey, R.W., George, L.H., Smith, R.L., LeBlanc, D.R., 1989, Transport of microspheres and indigenous bacteria through a sandy aquifer: Results of natural and forced-gradient tracer experiments. Environ. Sci. Technol., Vol. 23, p. 51-56.
  5. Kuwabara, J.S., and Harvey, R.W., 1990, Application of a hollow-fiber tangential-flow device for sampling suspended bacteria and particles from natural waters. J. Environ. Qual., Vol. 19, p. 625-629.
  6. Harvey, R.W., 1991, Parameters involved in modeling movement of bacteria in groundwater. In Hurst, C.J., ed., Modeling the Environmental Fate of Microorganisms: Washington, American Society for Microbiology, p. 89-114.
  7. Harvey, R.W., and Garabedian, S., 1991, Use of colloid filtration theory in modeling movement of bacteria through a contaminated sandy aquifer. Environ. Sci. Technol., Vol. 25, p. 178-185.
  8. Smith, R.L., Harvey, R.W., and LeBlanc, D.R., 1991, Importance of closely spaced vertical sampling in delineating chemical and microbiological gradients in groundwater studies. J. Contam. Hydrol., Vol. 7, p. 285-300.
  9. Bitton, G. and Harvey, R.W., 1992, Transport of pathogens through soil. In Mitchell, R., ed., Environmental Microbiology: New York, Wiley-Liss, pp. 103-124.
  10. Harvey, R.W. and Bouwer, E.J., 1992, Limits on quantitative descriptions of biocolloid mobility in contaminated groundwater. In McCarthy, J.F. and Wobber, F.J., eds., Concepts in Manipulating Groundwater Colloids for Environmental Restoration. London, Lewis Publishers, pp. 57-64.
  11. Harvey, R.W. and Garabedian, S., 1992, Response to comment on "Use of colloid filtration theory in modeling movement of bacteria through a contaminated sandy aquifer". Environ. Sci. Technol., Vol. 26, p.401-402.
  12. Harvey, R.W. and Widdowson, M., 1992, Microbial distributions, activities, and movement in the terrestrial subsurface: experimental and theoretical studies,

  13. in Wagenet, R.J., Baveye, P., and Stewart, B.A., eds., Interacting Processes in Soil Science: London, Lewis Publishers, pp. 185-225.
  14. Harvey, R.W. and Barber, L.B., 1992, Associations of free-living bacteria and dissolved organic compounds in a plume of contaminated groundwater. J. Contam. Hydrol., Vol. 9, p. 91-103.
  15. Scholl, M.A. and Harvey, R.W., 1992, Laboratory investigations on the role of sediment surface and groundwater chemistry in transport of bacteria through a contaminated sandy aquifer. Environ. Sci. Technol., Vol. 26, p. 1410-1417.
  16. Harvey, R.W., Kinner, N.E., MacDonald, D., Metge, D.W. and Bunn, A., 1993, Role of physical heterogeneity in the interpretation of small-scale laboratory and field observations of microorganism, microsphere, and bromide transport through aquifer sediments. Water Resour. Res., Vol. 29, p. 2713-2721.
  17. Metge. D.W., Brooks, M., Smith, R., and Harvey, R.W., 1993, Effect of treated-sewage contamination upon bacterial energy charge, adenine nucleotides, and DNA in a sandy aquifer on Cape Cod. Appl. Environ. Microbiol., Vol. 59, p. 2304-2310.
  18. Harvey, R.W., 1993, Fate and transport of bacteria injected into aquifers. Curr. Opin. Biotechnol., Vol. 4, 312-317 [invited summary of the state of the art, J. Tiedje (ed.)].
  19. Novarino, G., Warren, A., Kinner, N.E., and Harvey, R.W., 1994, Protists from a sewage-contaminated aquifer on Cape Cod, Massachusetts, U.S.A. Geomicrobiol. J., Vol. 12, p. 23-36.
  20. Bales, R.C., Li, S., Maguire, K.M., Yahya, M.T., Gerba, C.P., and Harvey, R.W., 1995, Virus and bacteria transport in a sandy aquifer, Cape Cod, MA. Ground Water, Vol. 33, p. 653-651.
  21. Barber, L.B., Krueger, C., Metge, D.W., Harvey, R.W., and Field, J.A., 1995, Fate of linear alkylbenzene sulfonate in groundwater: implications for in situ surfactant-enhanced remediation, in Sabatini, D.A., Knox, R.C., and Harwell, J.H., eds., Surfactant-Enhanced Subsurface Remediation: Washington, American Chemical Society, pp. 95-111.
  22. Harvey, R.W., Kinner, N.E., Bunn, A., MacDonald, D., and Metge, D., 1995, Transport behavior of groundwater protozoa and protozoa-sized microspheres in sandy aquifer sediments. Appl. Environ. Microbiol., Vol. 61, 209-217.
  23. Loveland, J.P., Ryan, J.N., Amy, G.L., and Harvey, R.W., 1996, The reversibility of virus attachment to mineral surfaces. Colloid Surfaces. A: Physicochem. Eng. Aspects, in press.
  24. Harvey, R.W., 1997, In situ and laboratory methods to study subsurface microbial transport. In Hurst, C.J., Knudsen, G.R., McInerney, M.J., Stetzenback, L.D., and Walter, M.V., eds., Manual of Environmental Microbiology: Washington, ASM Press, p. 586-599.
  25. Harvey, R.W., Suflita, J.M., and McInerney, M.J., 1997, Overview of issues in subsurface and landfill microbiology. In Hurst, C.J., Knudsen, G.R., McInerney, M.J., Stetzenback, L.D., and Walter, M.V., eds., Manual of Environmental Microbiology: Washington, ASM Press, p. 523-525.

  26.  
  27. Harvey, R.W., Metge, D.W., Kinner, N., and Mayberry, N., 1997, Physiological considerations in applying laboratory-determined buoyant densities to predictions of bacterial and protozoan transport in groundwater: Results of in-situ and laboratory tests. Environ. Sci. Technol., 31:289-295.
  28. Pieper, A.P., Ryan, J.N., Harvey, R.W., Amy, G.L., Illangasekare, T.H., and Metge, D.W., 1997, Transport and recovery of bacteriophage PRD1 in a sand and gravel aquifer: Effect of sewage-derived organic matter. Environ. Sci. Technol. 31:1163-1170.
  29. Harvey, R.W., Microorganisms as tracers in groundwater injection and recovery experiments: A review. FEMS Microbiol. Rev.  20:249-259.
  30. Novarino, G., Warren, A., Butler, H., Lambourne, G., Boxshall, A., Bateman, J., Kinner, N.E., Harvey, R.W., Mosse, R.A., and Teltsch, B., Protistan communities in aquifers: a review. FEMS Microbiol. Rev. 20:261-275.
  31. Kinner, N.E., Harvey, R.W., and Kazmierkiewicz-Tabaka, M., Effect of flagellates on free-living bacterial abundance in an organically-contaminated aquifer. FEMS Microbiol. Rev.  20:249-259

  32.  

    SURFACE WATER MICROBIOLOGY:

  33. Lion, L.W., Harvey, R.W., Young, L.Y., and Leckie, J.O., 1979, Particulate matter: Its association with microorganisms and trace metals in an estuarine salt marsh microlayer. Environ. Sci. Technol. Vol. 13. P. 1522-1525.
  34. Harvey, R.W. and Young, L.Y., 1980, Enrichment and association of bacteria and particulates in salt marsh surface water. Appl. Environ. Microbiol. Vol. 39, p.894-899.
  35. Harvey, R.W. and Young, L.Y., 1980, Enumeration of particle-bound and unattached respiring bacteria in the salt marsh environment. Appl. Environ. Microbiol. Vol. 40, p. 156-160.
  36. Harvey, R.W., Lion, L.W., Leckie, J.O., and Young, L.Y., 1982, Enrichment and association of lead and bacteria at particulate surfaces in a salt marsh microlayer. J. Mar. Res. Vol. 40, p. 1201-1211.
  37. Lion, L.W., Harvey, R.W., and Leckie, J.O., 1982, Mechanisms for trace metal enrichment at the surface microlayer in an estuarine salt marsh. Mar. Chem. Vol. 11, p. 235-244.
  38. Harvey, R.W., Lion, L.W., and Young, L.Y., 1983, Transport and distribution of bacteria and diatoms in the aqueous surface microlayer of a salt marsh. Estuar. Coast. Shelf Sci., Vol. 16, p. 543-547.
  39. Harvey, R.W., and Luoma, S.N., 1984, The role of bacterial exopolymer and suspended bacteria in the nutrition of the deposit-feeding clam, Macoma balthica. J. Mar. Res., Vol. 42, p. 957-968.
  40. Harvey, R.W., and Luoma, S.N., 1985, Separation of solute and particulate vectors of heavy metal uptake in controlled suspension-feeding experiments with Macoma balthica. Hydrobiologia, Vol. 121, p. 97-102.
  41. Harvey, R.W., and Luoma, S.N., 1985, Effect of adherent bacteria and bacterial extracellular polymers upon assimilation by Macoma balthica of sediment-bound Cd, Zn, and Ag. Mar. Ecol. Prog. Ser., Vol. 22, p. 281-289.
  42. Harvey, R.W., and Leckie, J.O., 1985, Sorption of lead onto two gram-negative marine bacteria in seawater. Mar. Chem., Vol. 15, P. 333-344.
  43. Harvey, R.W., 1987, A fluorochrome-staining technique for enumeration of bacteria in saline, organically enriched, alkaline lakes. Limnol. Oceanogr., Vol. 32, p. 993-995.
  44. Zehr, J.P., Harvey, R.W., Oremland, R.S., Cloern, J.C., George, L., and Lane, J.L., 1987, Big Soda Lake (Nevada). I. Pelagic bacterial heterotrophy and biomass. Limnol. Oceanogr., Vol. 32, p. 781-793.
  45. Oremland, R.S., Cloern, J.E., Smith, R.L., Culbertson, C.W., Zehr, J., Miller, L.C Cole, B., Harvey, R., Iverson, N., Klug, M., DesMarais, D.J., Rau, G., and Sofer, Z., 1988, Microbial and biochemical processes in Big Soda Lake, Nevada. In Fleet, A.J., Kelts, K., and Talbot, M.R., eds., Lacustrine Petroleum Source Rocks: Boston, Blackwell Scientific, p. 59-75.

  46.  
     
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    Recently Published Papers

    GROUNDWATER MICROBIOLOGY & SUBSURFACE MICROBIAL TRANSPORT:

    Bales, R.C., Li, S., Maguire, K.M., Yahya, M.T., Gerba, C.P., and Harvey, R.W., 1995, Virus and bacteria transport in a sandy aquifer, Cape Cod, MA. Ground Water, Vol. 33, p. 653-651.

    Harvey, R.W., Kinner, N.E., Bunn, A., MacDonald, D., and Metge, D., 1995, Transport behavior of groundwater protozoa and protozoa-sized microspheres in sandy aquifer sediments. Appl. Environ. Microbiol., Vol. 61, 209-217.

    Loveland, J.P., Ryan, J.N., Amy, G.L., and Harvey, R.W., 1996, The reversibility of virus attachment to mineral surfaces. Colloid Surfaces. A: Physicochem. Eng. Aspects, in press.

    Harvey, R.W., Metge, D.W., Kinner, N., and Mayberry, N., 1997, Physiological considerations in applying laboratory-determined buoyant densities to predictions of bacterial and protozoan transport in groundwater: Results of in-situ and laboratory tests. Environ. Sci. Technol., 31:289-295.

    Pieper, A.P., Ryan, J.N., Harvey, R.W., Amy, G.L., Illangasekare, T.H., and Metge, D.W., 1997, Transport and recovery of bacteriophage PRD1 in a sand and gravel aquifer: Effect of sewage-derived organic matter. Environ. Sci. Technol. 31:1163-1170.

    Harvey, R.W.,  Microorganisms as tracers in groundwater injection and recovery experiments: A review. FEMS Microbiol. Rev. 20:461-472.

    Novarino, G., Warren, A., Butler, H., Lambourne, G., Boxshall, A., Bateman, J., Kinner, N.E., Harvey, R.W., Mosse, R.A., and Teltsch, B.,  Protistan communities in aquifers: a review. FEMS Microbiol. Rev. 20:261-275.

    Kinner, N.E., Harvey, R.W., and Kazmierkiewicz-Tabaka, M., Effect of flagellates on free-living bacterial abundance in an organically-contaminated aquifer. FEMS Microbiol. Rev.  20:247-259.
     
     
     
     

    INVITED CHAPTERS (BOOKS):

    Barber, L.B., Krueger, C., Metge, D.W., Harvey, R.W., and Field, J.A., 1995, Fate of linear alkylbenzene sulfonate in groundwater: implications for in situ surfactant-enhanced remediation, in Sabatini, D.A., Knox, R.C., and Harwell, J.H., eds., Surfactant-Enhanced Subsurface Remediation: Washington, American Chemical Society, pp. 95-111
     

    Harvey, R.W., 1997, In situ and laboratory methods to study subsurface microbial transport. In Hurst, C.J., Knudsen, G.R., McInerney, M.J., Stetzenback, L.D., and Walter, M.V., eds., Manual of Environmental Microbiology: Washington, ASM Press, p. 586-599.
     
     
     

    Harvey, R.W., Suflita, J.M., and McInerney, M.J., 1997, Overview of issues in subsurface and landfill microbiology. In Hurst, C.J., Knudsen, G.R., McInerney, M.J., Stetzenback, L.D., and Walter, M.V., eds., Manual of Environmental Microbiology: Washington, ASM Press, p. 523-525.
     
     
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    Research Information

          Click on picture for further information
     
     

    We have concentrated on iterative lab and field experiments (figure above) to investigate the multifaceted factors  associated with microbial (protozoa-virus-bacteria) transport in the subsurface and how geochemistry affects them.  The illustrations below describe what may be going on at the microbial level.
    Click on either to see a larger picture.
     
     
    Protists Can Affect Subsuface Bacterial Populations
     Physical Factors Help Alter Subsurface Bacterial Populations
     
     
     
     
     
     

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        Project Facilities, Equipment and Resources

        This USGS project's resources include two epifluorescent research microscopes with computer controlled image capture/sizing, full microbial culture capabilities with access to anaerobic chambers, an HPLC, and a state-of-the-art flow cytometer with real time microbial cell counting and sizing capabilities.  Clean hood, high speed centrifuge, bacterial/protozoan/virus culture materials, and flow-column equipment are all available.  We maintain several bacterial and virus stocks for use in injection and recovery experiments.  We have recently begun to assay groundwater for pathogenic organisms (Cryptosporidium/Giardia, coliform, enteric virus, coliphage) and have some expertise in water quality assessments.  
 PC-coupled image analyses & microscope equipment
 10 + yrs of injection & recovery tests with a variety of microbes
Collaboration with major universities & governmental agencies
     
Full microbial culture & column resources
Onsite & offsite sample analyses
Rigorous lab testing of processes observed in field experiments   

 
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        Collaborative Projects

     NSF project with University of New Hampshire and the British Museum of Natural History has focused on laboratory and field experiments.  These were designed to understand the ecological role of protozoa in contaminated aquifers, describe mechanisms controlling protozoan transport in the subsurface, understand how protozoan-bacterial communities interact under contaminant conditions, and describe types of protozoa found in subsurface environments. The future of this work will focus on pathogenic protozoa (Cryptosporidium/Giardia) and how they become transported in aquifer environments. Findings have included the first taxonomy of subsurface protozoa, mechanisms controlling the rate of protozoan transport, grazing rates of protozoa upon the bacterial community, carefully monitored changes in population dynamics, and advancements in proper culture techniques for isolation and characterization of subsurface protozoa.

    EPA-funded project with CU - Boulder works on the mechanisms controlling viral transport in subsurface environments. Work has included injection and recovery experiments at the Cape Cod Toxics Site with single and dual radioisotope-labeled bacteriophage (nonpathogenic). These experiments were designed to help understand the mechanisms of viral sorption, desorption, inactivation, and transport within both contaminated and uncontaminated regions. Findings have included viral sorption-desorption kinetics, influence of surfactants upon viral transport, and rates of viral inactivation in subsurface systems.

    USGS Massachusetts District collaboration has focused upon the mechanisms controlling bacterial transport with both cultured isolates and indigenous bacterial populations within contaminated and uncontaminated regions of the Cape Cod Aquifer. Findings have included widely cited parameters for bacterial transport and methods used in injection and recovery experiments. Additionally, coupled field and laboratory experiments have helped better understand the importance of specific mechanisms such as sorption-desorption, microbial buoyant density, and pH have in controlling bacterial transport.
 

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